IGHV4-34

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV4-34 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of IGHV4-34’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGHV4-34 RNA is repressed in tumor relative to normal tissue. In most cancer types IGHV4-34 is over-expressed in tumor, although a few such as COAD and PAAD show the opposite, repressed pattern.

COAD, LUAD, and KIRC are the cancer types where IGHV4-34 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGHV4-34 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleII,III,IV−2.082<.00110view →
LUADFemaleII,III,IV+2.718<.0018view →
KIRCMaleAll+1.890<.0016view →
PAADFemaleAll−3.280.0382view →
READAllAll−3.038.0032view →
BLCAMaleAll+2.324.0372view →
LIHCMaleAll−2.293<.0012view →
LUSCAllAll+0.979.0172view →
STADAllIV−3.639.0411view →
HNSCAllIII,IV+1.525.0221view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration