IGHV4-34

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV4-34 RNA is linked to patient survival in 22 of 34 cancer types, making it the most broadly survival-associated IGHV4-34 data layer compared with 3 for mutation status and 7 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV4-34 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV4-34 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and UCEC are the cancer types where IGHV4-34 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6780.526<.001144view →
SKCMOSMedianAll0.3990.275<.001116view →
UCECDFSQuartileII,III,IV0.7100.229<.00152view →
BRCADFSQuartileAll0.9690.918.00345view →
SARCOSMedianAll0.8990.774<.00135view →
KIRPDFSQuartileAll0.7631.000.01023view →
LUADDFSTertileII,III,IV0.7450.438.00220view →
LIHCDFSTertileIII,IV0.5430.206.00716view →
UVMDFSMedianAll0.5900.860.01115view →
CESCDFSMedianII,III,IV0.8700.682.00514view →
MESOOSQuartileAll0.6960.405.00713view →
READDFSQuartileII,III,IV0.9410.698.01613view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 22 lineages.

Exploration