IGHV3OR16-8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3OR16-8 mutation is significantly associated with the RNA expression of many other genes, with 223 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IGHV3OR16-8-associated genes across cancer lineages are LINC01318, PINCR, and TPM4P1. Each is linked with IGHV3OR16-8 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV3OR16-8-to-partner and partner-to-IGHV3OR16-8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01318 grouped by IGHV3OR16-8-low versus IGHV3OR16-8-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3OR16-8→partner) and Y-score (partner→IGHV3OR16-8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCLINC01318 →+0.075+5.368.001.00532
COADPINCR →+0.470+4.383<.001<.00132
UCECTPM4P1 →+0.222+2.770<.001.00332
UCECIQCF2 →+0.225+2.626<.001.00632
UCECRNU6-33P →+0.650+2.860.002.00432
UCECRNA5SP436 →+0.636+3.715<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 223 associations by consensus.

LINC01318 by IGHV3OR16-8 expression — HNSC

Box plot of LINC01318 in IGHV3OR16-8-low vs IGHV3OR16-8-high samples in HNSC.

Explore this box plot interactively →

Exploration