IGHV3-60

associated omics data
immunoglobulin heavy variable 3-60 (pseudogene)Genealiases: []

Q-omics provides the consensus-scored IGHV3-60 profile across patient tissues and cancer cell-line models. IGHV3-60 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV3-60 is differentially expressed in 10, with the highest sampling consensus in COAD. Additionally, IGHV3-60 RNA expression shows 7,604 significant gene co-expression associations, with the highest sampling consensus in PAAD. Together, these results highlight HNSC, COAD, and PAAD as cancer lineages where IGHV3-60 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV3-60 survival associations across molecular data types. IGHV3-60 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV3-60 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24HNSC (143)view →
This table ranks reproducible IGHV3-60 RNA expression–survival associations across cancer types. High IGHV3-60 expression shows unfavorable associations in KICH, but favorable associations in HNSC, BRCA, SKCM, OV and UCEC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV3-60 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6710.536<.001143view →
BRCADFSTertileAll0.5320.469<.00190view →
SKCMOSMedianII,III,IV0.8230.629.00166view →
OVDFSTertileAll0.4500.345.00264view →
UCECOSTertileIII,IV0.7520.486.01548view →
KICHDFSTertileIII,IV0.0250.773<.00133view →
Pink = unfavorable, green = favorable. all 24 lineages →

IGHV3-60-HNSC (DFS)

Kaplan–Meier survival curve for IGHV3-60 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV3-60 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10. The strongest signals are observed in COAD for RNA.
IGHV3-60 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10COAD (9)view →
This table ranks reproducible tumor–normal expression differences for IGHV3-60. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV3-60 shows lower tumor expression in COAD, BRCA, READ and STAD and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGHV3-60 RNA expression in normal versus tumor tissue (log2 FC = −1.551, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADMaleAll−1.551<.0019view →
LUADMaleAll+1.258<.0017view →
BRCAFemaleII,III,IV−0.463<.0016view →
READAllAll−2.213<.0015view →
KIRCAllAll+0.388<.0014view →
STADAllIV−2.756.0132view →
Green = repressed in tumor. all 10 lineages →

IGHV3-60-COAD

Tumor-vs-normal expression box plot for IGHV3-60 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with IGHV3-60 in patient tissues and cancer cell lines. In patient samples, IGHV3-60 shows the broadest associations at the RNA and protein expression levels, with PAAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA7,604PAAD (2690)view →
Function (RNA)7,036BRCA (4290)view →