IGHV3-38

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-38 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,111 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGHV3-38-associated GO terms across cancer lineages are B cell mediated immunity, B cell receptor signaling pathway, and Regulation of B cell activation. Each is linked with IGHV3-38 in more than 29 cancer types. Because this analysis shows association rather than direction, both IGHV3-38-to-partner and partner-to-IGHV3-38 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-38→partner) and Y-score (partner→IGHV3-38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAB cell mediated immunity →+0.104+0.995<.001<.001330
CHOLB cell receptor signaling pathway →+0.103+1.432<.001.002329
CHOLRegulation of B cell activation →+0.060+1.155<.001.001328
CHOLPositive regulation of respiratory burst →+0.176+0.985<.001<.001328
CHOLRegulation of B cell differentiation →+0.080+1.424<.001.002328
THCAAntibacterial humoral response →+0.170+1.393<.001<.001328
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,111 associations by consensus.

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