IGHV3-38

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-38 RNA is linked to patient survival in 26 of 34 cancer types, making it the most broadly survival-associated IGHV3-38 data layer compared with 3 for mutation status and 6 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV3-38 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV3-38 expression acts as an unfavorable survival marker, although some lineages such as HNSC and BRCA show a favorable association.

HNSC, BRCA, and KIRP are the cancer types where IGHV3-38 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7880.631<.001144view →
BRCADFSMedianAll0.9710.927<.001120view →
KIRPOSTertileAll0.4780.781<.00166view →
COADDFSTertileAll0.7660.626.00457view →
SKCMDFSQuartileAll0.7040.544<.00147view →
MESOOSQuartileII,III,IV0.7600.491.00241view →
UCSDFSTertileIV0.1320.718.00236view →
LGGOSTertileAll0.6560.903<.00130view →
GBMDFSTertileAll0.0770.306<.00127view →
KIRCDFSMedianAll0.4980.729.00320view →
ACCOSTertileIV0.3270.633.04518view →
THYMOSTertileII,III,IV1.0000.500.00615view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 26 lineages.

Exploration