IGHV3-25

associated omics data
immunoglobulin heavy variable 3-25 (pseudogene)Genealiases: 3-25P · IGHV325

Q-omics provides the consensus-scored IGHV3-25 profile across patient tissues and cancer cell-line models. IGHV3-25 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV3-25 is differentially expressed in 11, with the highest sampling consensus in COAD. Additionally, IGHV3-25 RNA expression shows 8,410 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight HNSC, COAD, and TGCT as cancer lineages where IGHV3-25 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV3-25 survival associations across molecular data types. IGHV3-25 RNA expression shows survival associations in the most cancer types (23). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV3-25 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23HNSC (132)view →
This table ranks reproducible IGHV3-25 RNA expression–survival associations across cancer types. High IGHV3-25 expression shows unfavorable associations in UVM and STAD, but favorable associations in HNSC, UCEC, SKCM and BRCA. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV3-25 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianIII,IV0.4700.241<.001132view →
UCECOSTertileIII,IV0.7580.467.00480view →
SKCMOSMedianAll0.4070.268<.00178view →
UVMDFSTertileAll0.3350.779.00454view →
BRCAOSMedianAll0.9760.948.00151view →
STADDFSQuartileAll0.5240.718.00342view →
Pink = unfavorable, green = favorable. all 23 lineages →

IGHV3-25-HNSC (DFS)

Kaplan–Meier survival curve for IGHV3-25 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV3-25 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 11. The strongest signals are observed in COAD for RNA.
IGHV3-25 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot11COAD (9)view →
This table ranks reproducible tumor–normal expression differences for IGHV3-25. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV3-25 shows lower tumor expression in COAD, BRCA, READ and STAD and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGHV3-25 RNA expression in normal versus tumor tissue (log2 FC = −1.855, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−1.855<.0019view →
LUADFemaleII,III,IV+1.216<.0017view →
KIRCAllAll+0.306<.0015view →
BRCAFemaleII,III,IV−0.330<.0014view →
READAllAll−1.282<.0013view →
STADAllIV−2.203.0242view →
Green = repressed in tumor. all 11 lineages →

IGHV3-25-COAD

Tumor-vs-normal expression box plot for IGHV3-25 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with IGHV3-25 in patient tissues and cancer cell lines. In patient samples, IGHV3-25 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA8,410TGCT (2504)view →
Function (RNA)6,970BRCA (3859)view →