IGHV1-18

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV1-18 mutation is significantly associated with the RNA expression of many other genes, with 477 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IGHV1-18-associated genes across cancer lineages are DRD5P2, MIR6076, and ARFGAP3. Each is linked with IGHV1-18 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV1-18-to-partner and partner-to-IGHV1-18 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV1-18→partner) and Y-score (partner→IGHV1-18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDRD5P2 →+0.018+4.578<.001.00832
LUSCMIR6076 →+0.346+4.591.005.00432
SKCMARFGAP3 →+0.672+3.404.009.00432
UCECMED4 →+0.603+3.226.007.00932
BLCALINC00400 →+0.098+5.018<.001.00432
UCECMIR1251 →+0.180+4.300.002.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 477 associations by consensus.

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