IGHV1-18

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-18 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGHV1-18’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGHV1-18 RNA is repressed in tumor relative to normal tissue. In most cancer types IGHV1-18 is over-expressed in tumor, although a few such as COAD and LIHC show the opposite, repressed pattern.

COAD, LUAD, and LIHC are the cancer types where IGHV1-18 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGHV1-18 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−2.040<.0019view →
LUADFemaleAll+2.374<.0018view →
LIHCMaleAll−2.886<.0015view →
KIRCMaleAll+2.195<.0015view →
HNSCFemaleII,III,IV+2.300.0304view →
CHOLAllII,III,IV−2.750.0482view →
READAllAll−2.517.0062view →
LUSCAllAll+0.988.0301view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

Exploration