IGHV1-18

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-18 RNA is linked to patient survival in 23 of 34 cancer types, making it the most broadly survival-associated IGHV1-18 data layer compared with 3 for mutation status and 4 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV1-18 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV1-18 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and BRCA are the cancer types where IGHV1-18 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7550.636<.001144view →
SKCMDFSMedianAll0.6740.557<.001125view →
BRCADFSQuartileAll0.9770.918<.00179view →
UCECOSTertileIII,IV0.7090.348.00940view →
SARCOSQuartileAll0.8980.721.00131view →
LGGDFSQuartileAll0.3080.535.00530view →
GBMOSTertileAll0.2300.559.00127view →
LIHCDFSTertileIII,IV0.6380.230.00326view →
KIRPOSMedianAll0.6110.770.01316view →
CHOLDFSQuartileAll0.7950.242.01015view →
COADDFSMedianAll0.7610.633.00414view →
KIRCDFSTertileAll0.5020.711.01314view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 23 lineages.

Exploration