IGHV1-12

associated omics data
immunoglobulin heavy variable 1-12 (pseudogene)Genealiases: []

Q-omics provides the consensus-scored IGHV1-12 profile across patient tissues and cancer cell-line models. IGHV1-12 expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV1-12 is differentially expressed in 8, with the highest sampling consensus in COAD. Additionally, IGHV1-12 RNA expression shows 9,226 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight HNSC, COAD, and TGCT as cancer lineages where IGHV1-12 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV1-12 survival associations across molecular data types. IGHV1-12 RNA expression shows survival associations in the most cancer types (21). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV1-12 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21HNSC (129)view →
This table ranks reproducible IGHV1-12 RNA expression–survival associations across cancer types. High IGHV1-12 expression shows unfavorable associations in ACC and GBM, but favorable associations in HNSC, BRCA, SKCM and UCEC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV1-12 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7840.635<.001129view →
BRCADFSTertileAll0.5650.460<.001105view →
SKCMDFSMedianAll0.8330.675<.00180view →
ACCDFSTertileIII,IV0.0100.458<.00163view →
GBMOSTertileAll0.1990.437<.00145view →
UCECDFSMedianIII,IV0.7050.439.01232view →
Pink = unfavorable, green = favorable. all 21 lineages →

IGHV1-12-HNSC (DFS)

Kaplan–Meier survival curve for IGHV1-12 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV1-12 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in COAD for RNA.
IGHV1-12 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8COAD (10)view →
This table ranks reproducible tumor–normal expression differences for IGHV1-12. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV1-12 shows lower tumor expression in COAD, BRCA, STAD and READ and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGHV1-12 RNA expression in normal versus tumor tissue (log2 FC = −3.131, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−3.131<.00110view →
LUADAllAll+1.620<.0018view →
BRCAFemaleAll−0.470.0104view →
KIRCMaleAll+0.592.0043view →
STADAllIV−3.679.0052view →
READFemaleAll−2.502<.0012view →
Green = repressed in tumor. all 8 lineages →

IGHV1-12-COAD

Tumor-vs-normal expression box plot for IGHV1-12 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with IGHV1-12 in patient tissues and cancer cell lines. In patient samples, IGHV1-12 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA9,226TGCT (3130)view →
Function (RNA)7,102BRCA (4494)view →