HMGB3P19

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P19 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,135 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB3P19-associated GO terms across cancer lineages are Proteasome assembly, Microtubule cytoskeleton organization involved in mitosis, and Mitotic DNA integrity checkpoint signaling. Each is linked with HMGB3P19 in more than 7 cancer types. Because this analysis shows association rather than direction, both HMGB3P19-to-partner and partner-to-HMGB3P19 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P19→partner) and Y-score (partner→HMGB3P19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADProteasome assembly →+0.100+0.089<.001<.00138
STADMicrotubule cytoskeleton organization involved in mitosis →+0.107+0.089<.001<.00137
STADMitotic DNA integrity checkpoint signaling →+0.094+0.093<.001<.00137
STADProtein targeting to mitochondrion →+0.098+0.093<.001<.00137
STADMitotic spindle organization →+0.107+0.101<.001<.00137
STADPositive regulation of proteasomal protein catabolic process →+0.098+0.095<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,135 associations by consensus.

Exploration