HLTF

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HLTF protein abundance is significantly associated with the RNA expression of many other genes, with 20,204 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HLTF-associated genes across cancer lineages are WDR53, RAD51AP1, and KIF20A. Each is linked with HLTF in more than 6 cancer types. Because this analysis shows association rather than direction, both HLTF-to-partner and partner-to-HLTF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HLTF versus WDR53 in LSCC, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HLTF→partner) and Y-score (partner→HLTF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCWDR53 →+0.691+0.500<.001<.00137
LUADRAD51AP1 →+0.960+0.326<.001<.00136
HNSCKIF20A →+1.135+0.328<.001.00136
LSCCGMPS →+0.879+0.603<.001<.00136
LSCCPOLR2H →+0.641+0.491<.001<.00136
HNSCRFC4 →+1.040+0.374<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,204 associations by consensus.

HLTF vs WDR53 — LSCC

Per-sample scatter of HLTF vs WDR53 in LSCC (Pearson r = 0.50).

Explore this scatter interactively →

Exploration