HLA-DRB6

associated omics data
major histocompatibility complex, class II, DR beta 6 (pseudogene)Genealiases: []

Q-omics provides the consensus-scored HLA-DRB6 profile across patient tissues and cancer cell-line models. HLA-DRB6 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in SKCM. Among the 18 cancer types available for tumor–normal comparison, HLA-DRB6 is differentially expressed in 9, with the highest sampling consensus in KIRC. Additionally, HLA-DRB6 RNA expression shows 13,172 significant gene co-expression associations, with the highest sampling consensus in SARC. Together, these results highlight SKCM, KIRC, and SARC as cancer lineages where HLA-DRB6 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes HLA-DRB6 survival associations across molecular data types. HLA-DRB6 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
HLA-DRB6 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24SKCM (72)view →
This table ranks reproducible HLA-DRB6 RNA expression–survival associations across cancer types. High HLA-DRB6 expression shows unfavorable associations in UVM, LGG and LAML, but favorable associations in SKCM, HNSC and LIHC. The SKCM Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify SKCM as the clearest survival context for HLA-DRB6 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SKCMOSMedianAll0.4120.280<.00172view →
UVMOSTertileAll0.4050.845<.00165view →
HNSCDFSMedianAll0.7670.651.00164view →
LGGOSMedianAll0.3510.545<.00154view →
LIHCDFSQuartileII,III,IV0.6190.347<.00132view →
LAMLDFSTertileAll0.3440.612.00330view →
Pink = unfavorable, green = favorable. all 24 lineages →

HLA-DRB6-SKCM (OS)

Kaplan–Meier survival curve for HLA-DRB6 RNA expression in SKCM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes HLA-DRB6 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in KIRC for RNA.
HLA-DRB6 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9KIRC (9)view →
This table ranks reproducible tumor–normal expression differences for HLA-DRB6. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. HLA-DRB6 shows lower tumor expression in LUAD, LUSC and KICH and higher tumor expression in KIRC, THCA and ESCA. The KIRC box plot shows higher HLA-DRB6 RNA expression in tumor versus normal tissue (log2 FC = +1.924, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+1.924<.0019view →
LUADAllIII,IV−1.438<.0018view →
LUSCMaleII,III,IV−2.536<.0017view →
THCAMaleII,III,IV+1.706.0027view →
KICHAllII,III,IV−1.445.0017view →
ESCAAllII,III,IV+2.595.0212view →
Green = repressed in tumor. all 9 lineages →

HLA-DRB6-KIRC

Tumor-vs-normal expression box plot for HLA-DRB6 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with HLA-DRB6 in patient tissues and cancer cell lines. In patient samples, HLA-DRB6 shows the broadest associations at the RNA and protein expression levels, with SARC recurring as the lineage with the largest associated feature set. In cancer cell lines, HLA-DRB6 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_SCLC, while CRISPR and shRNA rows add functional-dependency signals in STOMACH.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA13,172SARC (3455)view →
Protein (mass-spec)12,962LSCC (5166)view →
Mutation
RNA6UCEC (6)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
shRNA
shRNA1,640LUNG_SCLC (183)view →
RNA1,561STOMACH (325)view →