FAM78A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM78A mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FAM78A-associated genes across cancer lineages are CPXCR1, OR10V1, and AQP12A. Each is linked with FAM78A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM78A-to-partner and partner-to-FAM78A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CPXCR1 grouped by FAM78A-low versus FAM78A-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM78A→partner) and Y-score (partner→FAM78A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaCPXCR1 →+0.087+4.234<.001<.00131
BLOOD_LeukemiaOR10V1 →+0.020+4.247<.001.00431
BLOOD_LeukemiaAQP12A →+0.119+4.099<.001<.00131
BLOOD_LeukemiaOR1J2 →+0.063+4.254<.001<.00131
BLOOD_LeukemiaKHDC3L →+0.162+3.096<.001.00531
BLOOD_LeukemiaOR1J4 →+0.123+2.948<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

CPXCR1 by FAM78A expression — BLOOD_Leukemia

Box plot of CPXCR1 in FAM78A-low vs FAM78A-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration