FAM120A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM120A mutation is significantly associated with the RNA expression of many other genes, with 5,353 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM120A-associated genes across cancer lineages are PSMB6, RN7SL712P, and MMP12. Each is linked with FAM120A in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM120A-to-partner and partner-to-FAM120A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PSMB6 grouped by FAM120A-low versus FAM120A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM120A→partner) and Y-score (partner→FAM120A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPSMB6 →+0.458+1.688<.001<.00134
SKCMRN7SL712P →+0.067+4.049<.001.00733
UCECMMP12 →+1.042+1.480<.001.00633
UCECPOLE2 →+0.585+1.699<.001<.00133
UCECGSKIP →+0.601+2.087<.001<.00133
UCECSMS →+0.600+2.467<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,353 associations by consensus.

PSMB6 by FAM120A expression — UCEC

Box plot of PSMB6 in FAM120A-low vs FAM120A-high samples in UCEC.

Explore this box plot interactively →

Exploration