CREM

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CREM mutation is significantly associated with the RNA expression of many other genes, with 3,765 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CREM-associated genes across cancer lineages are MIR8086, RPL35AP37, and WDR45BP1. Each is linked with CREM in more than 1 cancer types. Because this analysis shows association rather than direction, both CREM-to-partner and partner-to-CREM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR8086 grouped by CREM-low versus CREM-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CREM→partner) and Y-score (partner→CREM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAMIR8086 →+0.386+5.106<.001.00832
CESCRPL35AP37 →+0.140+4.196<.001.00332
UCECWDR45BP1 →+0.419+1.495<.001.00432
UCECSENP3-EIF4A1 →+0.112+2.011<.001<.00132
READMIR550A2 →+0.790+4.626<.001.00432
READRN7SL810P →+0.284+5.257<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,765 associations by consensus.

MIR8086 by CREM expression — BLCA

Box plot of MIR8086 in CREM-low vs CREM-high samples in BLCA.

Explore this box plot interactively →

Exploration