SENP3-EIF4A1

associated omics data
SENP3-EIF4A1 readthrough (NMD candidate)Genealiases: []

Q-omics provides the consensus-scored SENP3-EIF4A1 profile across patient tissues and cancer cell-line models. SENP3-EIF4A1 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, SENP3-EIF4A1 is differentially expressed in 13, with the highest sampling consensus in HNSC. Additionally, SENP3-EIF4A1 RNA expression shows 16,404 significant gene co-expression associations, with the highest sampling consensus in KIRP. Together, these results highlight KIRC, HNSC, and KIRP as cancer lineages where SENP3-EIF4A1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SENP3-EIF4A1 survival associations across molecular data types. SENP3-EIF4A1 RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SENP3-EIF4A1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20KIRC (74)view →
This table ranks reproducible SENP3-EIF4A1 RNA expression–survival associations across cancer types. High SENP3-EIF4A1 expression shows unfavorable associations in KIRC, LIHC, ACC, LGG, SKCM and OV. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .002). Together, the overview and detailed table identify KIRC as the clearest survival context for SENP3-EIF4A1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSQuartileII,III,IV0.3120.705.00274view →
LIHCOSTertileAll0.4290.626<.00173view →
ACCDFSMedianAll0.4140.703<.00167view →
LGGDFSTertileAll0.6670.815<.00134view →
SKCMDFSTertileAll0.1680.388<.00132view →
OVDFSQuartileIII,IV0.4530.559.00322view →
Pink = unfavorable, green = favorable. all 20 lineages →

SENP3-EIF4A1-KIRC (DFS)

Kaplan–Meier survival curve for SENP3-EIF4A1 RNA expression in KIRC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes SENP3-EIF4A1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13. The strongest signals are observed in HNSC for RNA.
SENP3-EIF4A1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13HNSC (9)view →
This table ranks reproducible tumor–normal expression differences for SENP3-EIF4A1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SENP3-EIF4A1 shows higher tumor expression in HNSC, KIRC, BLCA, UCEC, COAD and KIRP. The HNSC box plot shows higher SENP3-EIF4A1 RNA expression in tumor versus normal tissue (log2 FC = +0.117, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCAllAll+0.117<.0019view →
KIRCAllAll+0.033<.0018view →
BLCAAllIII,IV+0.209.0026view →
UCECAllIII,IV+0.201<.0016view →
COADAllII,III,IV+0.140<.0016view →
KIRPFemaleAll+0.058.0054view →
Green = repressed in tumor. all 13 lineages →

SENP3-EIF4A1-HNSC

Tumor-vs-normal expression box plot for SENP3-EIF4A1 in HNSC.

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Cross-omics associations

This table shows molecular features associated with SENP3-EIF4A1 in patient tissues and cancer cell lines. In patient samples, SENP3-EIF4A1 shows the broadest associations at the RNA and protein expression levels, with KIRP recurring as the lineage with the largest associated feature set. In cancer cell lines, SENP3-EIF4A1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BREAST.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA16,404KIRP (5652)view →
Protein (mass-spec)7,981UCEC (2043)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
shRNA
RNA2,471BREAST (928)view →
shRNA1,965BREAST (314)view →