COL6A4P1

Across TCGA patient cohorts, COL6A4P1 mutation is significantly associated with the RNA expression of many other genes, with 846 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COL6A4P1-associated genes across cancer lineages are RN7SL248P, RN7SL447P, and LINC02222. Each is linked with COL6A4P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both COL6A4P1-to-partner and partner-to-COL6A4P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL248P grouped by COL6A4P1-low versus COL6A4P1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL6A4P1→partner) and Y-score (partner→COL6A4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SL248P →	+0.077	+3.606	<.001	.002	3	2
CESC	RN7SL447P →	+0.159	+5.201	<.001	.007	3	1
CESC	LINC02222 →	+0.052	+6.837	<.001	<.001	3	1
CESC	RNA5SP367 →	+0.298	+5.010	.002	.009	3	1
CESC	ZACNP1 →	+0.060	+6.144	<.001	.001	3	1
CESC	NPBWR2 →	+0.036	+5.010	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 846 associations by consensus.

RN7SL248P by COL6A4P1 expression — UCEC

Explore this box plot interactively →