CMTM6

associated omics data
CKLF like MARVEL transmembrane domain containing 6Genealiases: CKLFSF6 · PRO2219

Q-omics provides the consensus-scored CMTM6 profile across patient tissues and cancer cell-line models. CMTM6 expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, CMTM6 is differentially expressed in 12, with the highest sampling consensus in BLCA. Additionally, CMTM6 RNA expression shows 19,814 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight ACC, and BLCA as cancer lineages where CMTM6 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CMTM6 survival associations across molecular data types. CMTM6 RNA expression shows survival associations in the most cancer types (22), followed by mutation status (2) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CMTM6 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22ACC (114)view →
Protein (mass-spec)Kaplan–Meier5LUAD (13)view →
MutationKaplan–Meier2STAD (18)view →
This table ranks reproducible CMTM6 RNA expression–survival associations across cancer types. High CMTM6 expression shows unfavorable associations in ACC, LGG, MESO and KICH, but favorable associations in BRCA and SKCM. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for CMTM6 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSMedianAll0.2130.668<.001114view →
LGGOSMedianAll0.7200.909<.00154view →
BRCADFSMedianII,III,IV0.9620.919.00147view →
MESOOSQuartileAll0.2010.536<.00138view →
KICHDFSQuartileIII,IV0.1781.000.00331view →
SKCMOSQuartileAll0.3870.237.00328view →
Pink = unfavorable, green = favorable. all 22 lineages →

CMTM6-ACC (DFS)

Kaplan–Meier survival curve for CMTM6 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CMTM6 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12, while mass-spec protein shows differences in 3. The strongest signals are observed in BLCA for RNA and LSCC for protein.
CMTM6 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot12BLCA (12)view →
Protein (mass-spec)Box plot3LSCC (6)view →
This table ranks reproducible tumor–normal expression differences for CMTM6. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CMTM6 shows lower tumor expression in KICH, LUSC and LIHC and higher tumor expression in BLCA, STAD and BRCA. The BLCA box plot shows higher CMTM6 RNA expression in tumor versus normal tissue (log2 FC = +1.572, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAAllIV+1.572<.00112view →
STADFemaleAll+1.201<.0019view →
KICHAllAll−0.700<.0016view →
LUSCFemaleAll−0.396.0135view →
BRCAAllII,III,IV+0.409<.0014view →
LIHCAllAll−0.447<.0013view →
Green = repressed in tumor. all 12 lineages →

CMTM6-BLCA

Tumor-vs-normal expression box plot for CMTM6 in BLCA.

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Cross-omics associations

This table shows molecular features associated with CMTM6 in patient tissues and cancer cell lines. In patient samples, CMTM6 shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set. In cancer cell lines, CMTM6 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in UPPER_AERODIGESTIVE_TRACT and BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,814ACC (9341)view →
Protein (mass-spec)10,368GBM (2558)view →
Protein (mass-spec)
Protein (mass-spec)11,211BRCA (3557)view →
RNA7,920BRCA (3360)view →
Mutation
RNA490UCEC (482)view →
Protein (RPPA)11UCEC (11)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,696PANCREAS (134)view →
shRNA1,277UPPER_AERODIGESTIVE_TRACT (150)view →
RNA
RNA11,304BONE (3030)view →
Function (RNA)5,127BONE (1784)view →
shRNA
RNA1,560LUNG_SCLC (567)view →
shRNA1,443LUNG_NSCLC_LUAD (309)view →
Mutation
Mutation751LARGE_INTESTINE (401)view →
RNA5BLOOD_Leukemia (5)view →