CHRM3-AS2

associated omics data
CHRM3 antisense RNA 2Genealiases: []

Q-omics provides the consensus-scored CHRM3-AS2 profile across patient tissues and cancer cell-line models. CHRM3-AS2 expression is associated with patient survival in 26 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, CHRM3-AS2 is differentially expressed in 8, with the highest sampling consensus in KIRC. Additionally, CHRM3-AS2 RNA expression shows 18,085 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight HNSC, KIRC, and LSCC as cancer lineages where CHRM3-AS2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CHRM3-AS2 survival associations across molecular data types. CHRM3-AS2 RNA expression shows survival associations in the most cancer types (26). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CHRM3-AS2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier26HNSC (96)view →
This table ranks reproducible CHRM3-AS2 RNA expression–survival associations across cancer types. High CHRM3-AS2 expression shows unfavorable associations in LGG, but favorable associations in HNSC, BRCA, SKCM, BLCA and CESC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for CHRM3-AS2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSMedianAll0.7990.705<.00196view →
BRCADFSMedianAll0.6240.451<.00169view →
SKCMOSMedianAll0.4320.241<.00166view →
BLCAOSMedianIV0.6840.495.00164view →
LGGOSMedianAll0.7370.860<.00151view →
CESCOSMedianAll0.8760.720<.00142view →
Pink = unfavorable, green = favorable. all 26 lineages →

CHRM3-AS2-HNSC (OS)

Kaplan–Meier survival curve for CHRM3-AS2 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CHRM3-AS2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in KIRC for RNA.
CHRM3-AS2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8KIRC (11)view →
This table ranks reproducible tumor–normal expression differences for CHRM3-AS2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CHRM3-AS2 shows lower tumor expression in KIRC, KIRP, KICH, COAD, THCA and BRCA. The KIRC box plot shows higher CHRM3-AS2 RNA expression in normal versus tumor tissue (log2 FC = −0.449, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll−0.449<.00111view →
KIRPMaleII,III,IV−0.574<.0019view →
KICHAllAll−0.355<.0016view →
COADFemaleAll−0.296<.0016view →
THCAAllAll−0.324.0132view →
BRCAAllIII,IV−0.111.0022view →
Green = repressed in tumor. all 8 lineages →

CHRM3-AS2-KIRC

Tumor-vs-normal expression box plot for CHRM3-AS2 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CHRM3-AS2 in patient tissues and cancer cell lines. In patient samples, CHRM3-AS2 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)18,085LSCC (4724)view →
RNA14,597TGCT (3934)view →