CGRRF1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CGRRF1 mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CGRRF1-associated genes across cancer lineages are eEF2, INPP4B, and MEK1. Each is linked with CGRRF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CGRRF1-to-partner and partner-to-CGRRF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by CGRRF1-low versus CGRRF1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CGRRF1→partner) and Y-score (partner→CGRRF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.515+3.169.005.01931
UCECINPP4B →-0.397-3.169.019.01931
UCECMEK1 →+0.519+3.321.006.01031
UCECmTOR_pS2448 →-0.206-3.321.008.01031
UCECp62 Lck ligand →+0.589+3.009<.001.01931
UCECBRCA2 →-0.160-3.314.016.01011
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

eEF2 by CGRRF1 expression — UCEC

Box plot of eEF2 in CGRRF1-low vs CGRRF1-high samples in UCEC.

Explore this box plot interactively →

Exploration