CCDC96

Across TCGA cell cohorts, CCDC96 mutation is significantly associated with the RNA expression of many other genes, with 387 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC96-associated genes across cancer lineages are CA5A, PCDH11Y, and ANKRD54. Each is linked with CCDC96 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC96-to-partner and partner-to-CCDC96 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CA5A grouped by CCDC96-low versus CCDC96-high in URINARY_TRACT.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC96→partner) and Y-score (partner→CCDC96) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	CA5A →	+0.020	+5.087	<.001	.004	3	1
URINARY_TRACT	PCDH11Y →	+0.016	+5.087	<.001	.004	3	1
LARGE_INTESTINE	ANKRD54 →	+0.588	+3.588	<.001	<.001	3	1
LARGE_INTESTINE	CBY1 →	+0.587	+2.451	.001	.009	3	1
LARGE_INTESTINE	L3MBTL2 →	+0.682	+3.169	<.001	.006	3	1
LARGE_INTESTINE	TRMU →	+0.630	+3.502	.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 387 associations by consensus.

CA5A by CCDC96 expression — URINARY_TRACT

Explore this box plot interactively →