CCDC58P3

Across TCGA patient cohorts, CCDC58P3 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,416 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC58P3-associated proteins across cancer lineages are RFC4, RSRC1, and SNRNP40. Each is linked with CCDC58P3 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC58P3-to-partner and partner-to-CCDC58P3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC58P3 versus RFC4 in LSCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC58P3→partner) and Y-score (partner→CCDC58P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RFC4 →	+0.351	+0.843	<.001	<.001	3	4
PDAC	RSRC1 →	+0.268	+0.555	<.001	<.001	3	4
PDAC	SNRNP40 →	+0.193	+0.537	<.001	<.001	3	4
UCEC	AATF →	+0.349	+0.857	<.001	<.001	3	4
HNSC	SUPT6H →	+0.190	+0.867	.001	.001	3	4
LSCC	BYSL →	+0.305	+0.809	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,416 associations by consensus.

CCDC58P3 vs RFC4 — LSCC

Explore this scatter interactively →