CCDC28A-AS1

Across TCGA cell cohorts, CCDC28A-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,803 significant associations in total. PANCREAS shows the largest number of these associations.

The most reproducible CCDC28A-AS1-associated GO terms across cancer lineages are DNA-templated DNA replication maintenance of fidelity, Double-strand break repair, and Double-strand break repair via homologous recombination. Each is linked with CCDC28A-AS1 in more than 16 cancer types. Because this analysis shows association rather than direction, both CCDC28A-AS1-to-partner and partner-to-CCDC28A-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA-templated DNA replication maintenance of fidelity grouped by CCDC28A-AS1-low versus CCDC28A-AS1-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC28A-AS1→partner) and Y-score (partner→CCDC28A-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	DNA-templated DNA replication maintenance of fidelity →	+0.137	+0.350	.002	<.001	3	17
BONE	Double-strand break repair →	+0.099	+0.423	<.001	<.001	3	16
BONE	Double-strand break repair via homologous recombination →	+0.094	+0.373	<.001	<.001	3	16
BONE	Recombinational repair →	+0.112	+0.449	<.001	<.001	3	16
BONE	DNA replication →	+0.156	+0.377	<.001	<.001	3	16
BONE	DNA-templated DNA replication →	+0.171	+0.369	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,803 associations by consensus.

DNA-templated DNA replication maintenance of fidelity by CCDC28A-AS1 expression — BONE

Explore this box plot interactively →