CALM2P4

Across TCGA patient cohorts, CALM2P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,631 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CALM2P4-associated GO terms across cancer lineages are Golgi vesicle transport, Golgi organization, and Vesicle tethering. Each is linked with CALM2P4 in more than 19 cancer types. Because this analysis shows association rather than direction, both CALM2P4-to-partner and partner-to-CALM2P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by CALM2P4-low versus CALM2P4-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CALM2P4→partner) and Y-score (partner→CALM2P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Golgi vesicle transport →	+0.062	+0.325	<.001	<.001	3	20
STAD	Golgi organization →	+0.053	+0.286	<.001	<.001	3	19
STAD	Vesicle tethering →	+0.063	+0.381	<.001	<.001	3	18
STAD	tRNA modification →	+0.054	+0.310	<.001	<.001	3	18
STAD	Membrane lipid metabolic process →	+0.037	+0.292	<.001	<.001	3	18
ESCA	Vesicle budding from membrane →	+0.065	+0.261	.002	.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,631 associations by consensus.

Golgi vesicle transport by CALM2P4 expression — STAD

Explore this box plot interactively →