CACNA1C-IT2

associated omics data
CACNA1C intronic transcript 2Genealiases: []

Q-omics provides the consensus-scored CACNA1C-IT2 profile across patient tissues and cancer cell-line models. CACNA1C-IT2 expression is associated with patient survival in 15 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, CACNA1C-IT2 is differentially expressed in 10, with the highest sampling consensus in UCEC. Additionally, CACNA1C-IT2 RNA expression shows 9,303 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight BRCA, UCEC, and TGCT as cancer lineages where CACNA1C-IT2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CACNA1C-IT2 survival associations across molecular data types. CACNA1C-IT2 RNA expression shows survival associations in the most cancer types (15). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CACNA1C-IT2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier15BRCA (76)view →
This table ranks reproducible CACNA1C-IT2 RNA expression–survival associations across cancer types. High CACNA1C-IT2 expression shows unfavorable associations in BRCA, ACC, READ and SKCM, but favorable associations in CHOL and LUAD. The BRCA Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify BRCA as the clearest survival context for CACNA1C-IT2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCADFSMedianII,III,IV0.8440.914<.00176view →
ACCDFSTertileAll0.3670.732.00144view →
READDFSTertileIV0.0270.636<.00136view →
CHOLOSQuartileAll0.9420.490.01032view →
LUADOSTertileIII,IV0.6810.460.02630view →
SKCMDFSTertileII,III,IV0.1080.246.00224view →
Pink = unfavorable, green = favorable. all 15 lineages →

CACNA1C-IT2-BRCA (DFS)

Kaplan–Meier survival curve for CACNA1C-IT2 RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CACNA1C-IT2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10. The strongest signals are observed in BLCA for RNA.
CACNA1C-IT2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10BLCA (6)view →
This table ranks reproducible tumor–normal expression differences for CACNA1C-IT2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CACNA1C-IT2 shows lower tumor expression in UCEC, BLCA, READ and PRAD and higher tumor expression in THCA and HNSC. The UCEC box plot shows higher CACNA1C-IT2 RNA expression in normal versus tumor tissue (log2 FC = −0.508, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
UCECAllAll−0.508<.0016view →
BLCAAllIII,IV−0.397.0146view →
THCAAllAll+0.049<.0014view →
HNSCAllIII,IV+0.040.0064view →
READAllAll−0.186.0172view →
PRADAllAll−0.099.0082view →
Green = repressed in tumor. all 10 lineages →

CACNA1C-IT2-UCEC

Tumor-vs-normal expression box plot for CACNA1C-IT2 in UCEC.

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Cross-omics associations

This table shows molecular features associated with CACNA1C-IT2 in patient tissues and cancer cell lines. In patient samples, CACNA1C-IT2 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA9,303TGCT (4019)view →
Protein (mass-spec)7,119UCEC (2461)view →