CACNA1C-IT2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CACNA1C-IT2 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of CACNA1C-IT2’s most consistent transcriptional readouts.

The strongest signal is observed in uterine corpus endometrial carcinoma (UCEC), where CACNA1C-IT2 RNA is repressed in tumor relative to normal tissue. In most cancer types CACNA1C-IT2 is over-expressed in tumor, although a few such as UCEC and BLCA show the opposite, repressed pattern.

UCEC, BLCA, and THCA are the cancer types where CACNA1C-IT2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CACNA1C-IT2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
UCECAllAll−0.508<.0016view →
BLCAAllIII,IV−0.397.0146view →
THCAAllAll+0.049<.0014view →
HNSCAllIII,IV+0.040.0064view →
READAllAll−0.186.0172view →
PRADAllAll−0.099.0082view →
LUSCMaleAll−0.072.0322view →
BRCAFemaleAll−0.057.0122view →
STADAllAll−0.132.0201view →
KIRCMaleIV+0.104.0141view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

CACNA1C-IT2–UCEC

Tumor-vs-normal expression box plot for CACNA1C-IT2 RNA in UCEC.

Open the UCEC breakdown →

Exploration