C9orf62

Across TCGA patient cohorts, C9orf62 mutation is significantly associated with the RNA expression of many other genes, with 137 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C9orf62-associated genes across cancer lineages are LINC01050, MIR6766, and RN7SL197P. Each is linked with C9orf62 in more than 1 cancer types. Because this analysis shows association rather than direction, both C9orf62-to-partner and partner-to-C9orf62 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01050 grouped by C9orf62-low versus C9orf62-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C9orf62→partner) and Y-score (partner→C9orf62) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	LINC01050 →	+0.223	+2.702	.005	.004	3	1
UCEC	MIR6766 →	+0.397	+3.136	<.001	.008	3	1
UCEC	RN7SL197P →	+0.251	+3.599	<.001	<.001	3	1
UCEC	MIR7976 →	+0.574	+2.868	<.001	.006	3	1
UCEC	MIR6783 →	+0.650	+2.517	.001	.008	3	1
UCEC	SPDYE9 →	+0.006	+4.049	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 137 associations by consensus.

LINC01050 by C9orf62 expression — UCEC

Explore this box plot interactively →