C20orf197

Across TCGA patient cohorts, C20orf197 mutation is significantly associated with the RNA expression of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C20orf197-associated genes across cancer lineages are RNA5SP369, RN7SL248P, and LINC01519. Each is linked with C20orf197 in more than 1 cancer types. Because this analysis shows association rather than direction, both C20orf197-to-partner and partner-to-C20orf197 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP369 grouped by C20orf197-low versus C20orf197-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C20orf197→partner) and Y-score (partner→C20orf197) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNA5SP369 →	+0.710	+3.193	<.001	.004	3	2
UCEC	RN7SL248P →	+0.225	+5.722	<.001	<.001	3	1
SKCM	LINC01519 →	+0.016	+4.385	.002	.008	3	1
SKCM	PSMC1P6 →	+0.020	+4.495	<.001	.007	3	1
SKCM	MARK2P17 →	+0.234	+3.933	<.001	.007	3	1
SKCM	EGFLAM-AS1 →	+0.114	+4.118	.003	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

RNA5SP369 by C20orf197 expression — UCEC

Explore this box plot interactively →