C1QTNF9

Across TCGA patient cohorts, C1QTNF9 mutation is significantly associated with the RNA expression of many other genes, with 781 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible C1QTNF9-associated genes across cancer lineages are HNRNPMP2, RNU6-453P, and AKIP1. Each is linked with C1QTNF9 in more than 1 cancer types. Because this analysis shows association rather than direction, both C1QTNF9-to-partner and partner-to-C1QTNF9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HNRNPMP2 grouped by C1QTNF9-low versus C1QTNF9-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1QTNF9→partner) and Y-score (partner→C1QTNF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	HNRNPMP2 →	+0.080	+6.342	<.001	.001	3	2
SKCM	RNU6-453P →	+0.134	+3.209	<.001	.004	3	2
SKCM	AKIP1 →	+0.413	+3.221	.002	.009	3	2
CESC	RNU6-220P →	+0.412	+6.342	<.001	.001	3	2
SKCM	CTNNAL1 →	+0.815	+1.951	.005	.009	3	2
BLCA	LINC00459 →	+0.110	+4.433	<.001	.007	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 781 associations by consensus.

HNRNPMP2 by C1QTNF9 expression — CESC

Explore this box plot interactively →