C19orf44

Across TCGA patient cohorts, C19orf44 mutation is significantly associated with the RNA expression of many other genes, with 4,424 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C19orf44-associated genes across cancer lineages are RNU6-660P, LINC01784, and EEF1E1-BLOC1S5. Each is linked with C19orf44 in more than 2 cancer types. Because this analysis shows association rather than direction, both C19orf44-to-partner and partner-to-C19orf44 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-660P grouped by C19orf44-low versus C19orf44-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C19orf44→partner) and Y-score (partner→C19orf44) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	RNU6-660P →	+0.284	+4.147	<.001	.008	3	3
SKCM	LINC01784 →	+0.055	+6.495	<.001	<.001	3	3
CESC	EEF1E1-BLOC1S5 →	+0.057	+5.969	<.001	.002	3	3
READ	CDRT15P8 →	+0.092	+4.421	<.001	.009	3	2
READ	CDY3P →	+0.037	+6.276	<.001	<.001	3	2
READ	ATP5F1AP7 →	+0.070	+4.421	<.001	.009	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,424 associations by consensus.

RNU6-660P by C19orf44 expression — SKCM

Explore this box plot interactively →