ABI3BP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABI3BP protein abundance is significantly associated with the RNA expression of many other genes, with 16,181 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible ABI3BP-associated genes across cancer lineages are MGP, ABCA8, and SYNPO2. Each is linked with ABI3BP in more than 8 cancer types. Because this analysis shows association rather than direction, both ABI3BP-to-partner and partner-to-ABI3BP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABI3BP versus MGP in GBM, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABI3BP→partner) and Y-score (partner→ABI3BP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMGP →+1.760+0.902<.001<.00139
BRCAABCA8 →+1.396+1.093<.001<.00139
UCECSYNPO2 →+1.311+0.605<.001<.00139
PDACFCER1A →+1.671+0.764<.001<.00139
BRCACOL14A1 →+1.935+1.100<.001<.00139
BRCACHRDL1 →+1.874+0.950<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,181 associations by consensus.

ABI3BP vs MGP — GBM

Per-sample scatter of ABI3BP vs MGP in GBM (Pearson r = 0.42).

Explore this scatter interactively →

Exploration