Positive regulation of fibroblast apoptotic process

pathway activity — cross-omics
GO:2000271Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of fibroblast apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are OCLN, NIBAN2, and BSPRY, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of fibroblast apoptotic process activity versus OCLN in PDAC (Pearson r = -0.35).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACOCLN →-0.497-0.075.001<.00137
HNSCNIBAN2 →-0.355-0.066<.001.00136
BRCABSPRY →-0.537-0.045.001.00827
BRCALRBA →-0.490-0.095<.001<.00136
LUADFAM120A →-0.216-0.065<.001<.00136
HNSCFNDC3B →+0.266+0.073.003.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000271 vs OCLN — PDAC

Per-sample scatter of Positive regulation of fibroblast apoptotic process activity vs OCLN in PDAC.

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Exploration