Positive regulation of voltage-gated potassium channel activity

pathway activity — cross-omics
GO:1903818Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of voltage-gated potassium channel activity pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are WIPF2, SFXN1, and C1orf226_S223, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of voltage-gated potassium channel activity activity versus WIPF2 in BRCA (Pearson r = 0.15).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAWIPF2 →+0.231+0.036.004<.00135
CCRCCSFXN1 →+0.264+0.061.002.00134
BRCAC1orf226_S223 →+0.751+0.057.001<.00134
LSCCPRG2 →-0.677-0.049<.001<.00134
LUADPDGFRB →-0.203-0.047.002.00634
LUADPMVK →+0.288+0.056.009.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903818 vs WIPF2 — BRCA

Per-sample scatter of Positive regulation of voltage-gated potassium channel activity activity vs WIPF2 in BRCA.

Explore this scatter interactively →

Exploration