Positive regulation of voltage-gated potassium channel activity

pathway activity — cross-omics
GO:1903818Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of voltage-gated potassium channel activity pathway is significantly associated with the RNA expression of multiple genes, with the KIDNEY cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NEDD4L, PELI3, and CERS1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, NEDD4L grouped by Positive regulation of voltage-gated potassium channel activity-low versus -high activity in KIDNEY.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYNEDD4L →+1.352+0.999<.001.00434
BLOOD_LeukemiaPELI3 →-2.035-1.456<.001.00134
SKINCERS1 →+1.175+0.957.001<.00133
LUNG_NSCLC_LUADTTC19 →+0.703+0.936.005.00433
LIVERNQO2 →-1.667-1.343.002.00224
LUNG_NSCLC_LUADCASP1 →-1.504-1.075.004.00224
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

NEDD4L by Positive regulation of voltage-gated potassium channel activity activity — KIDNEY

Box plot of NEDD4L in Positive regulation of voltage-gated potassium channel activity-low vs -high samples in KIDNEY.

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Exploration