Positive regulation of phospholipid metabolic process

Across TCGA cell cohorts, RNA activity of the Positive regulation of phospholipid metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the BREAST cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ANKRD16, FXN, and ITGAV, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, ANKRD16 grouped by Positive regulation of phospholipid metabolic process-low versus -high activity in BREAST.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	ANKRD16 →	+0.744	+0.826	<.001	.004	3	5
STOMACH	FXN →	+0.910	+0.930	.003	.006	3	4
LUNG_NSCLC_LUAD	ITGAV →	+1.058	+0.701	.001	.001	3	4
BREAST	PGAP2 →	+0.810	+0.760	<.001	<.001	3	3
BLOOD_Myeloma	AK4 →	-1.605	-1.374	.009	<.001	3	3
BLOOD_Myeloma	NPM1 →	-0.742	-1.617	.009	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

ANKRD16 by Positive regulation of phospholipid metabolic process activity — BREAST

Explore this box plot interactively →