Organic hydroxy compound catabolic process

pathway activity — cross-omics
GO:1901616Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Organic hydroxy compound catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the SARC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MAOA, LDHD, and OSGIN1, each associated with the pathway in up to 23 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SARCMAOA →+1.787+0.029<.001<.001321
CHOLLDHD →+1.980+0.064.001.008123
LIHCOSGIN1 →+1.192+0.046<.001<.001319
SARCMAOB →+2.699+0.028<.001<.001319
LIHCTCF3 →-0.906-0.060<.001<.001318
SCLCFAH →+0.942+0.081<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration