Regulation of potassium ion transmembrane transport

associated omics data
GO:1901379Ontology (GO BP)GO biological process · ~84 member genes

Q-omics provides the Regulation of potassium ion transmembrane transport (GO:1901379) pathway profile, scoring each patient from the combined activity of its roughly 84 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 9, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 35,950 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight KIRP, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of potassium ion transmembrane transport survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20KIRP (96)view →
GO function (Protein (mass-spec))Kaplan–Meier5LSCC (56)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of potassium ion transmembrane transport activity shows favorable associations in KIRP, UVM and SKCM, but unfavorable associations in LUAD, UCEC and ESCA. In the KIRP Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). KIRP ranks highest by sampling consensus for Regulation of potassium ion transmembrane transport.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSTertileAll0.9630.782<.00196view →
UVMOSMedianIII,IV1.0000.318.01345view →
SKCMOSQuartileIII,IV0.5950.357.00438view →
LUADOSQuartileII,III,IV0.5780.777.00637view →
UCECDFSTertileAll0.8570.932.00226view →
ESCADFSMedianII,III,IV0.2701.000.00121view →
Pink = unfavorable, green = favorable. all 20 lineages →

Regulation of potassium ion transmembrane transport-KIRP (DFS)

Kaplan–Meier survival curve for Regulation of potassium ion transmembrane transport pathway activity in KIRP: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Regulation of potassium ion transmembrane transport tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 9 cancer types, while mass-spec protein activity shows differences in 7. The strongest signals are in KIRC for RNA and CCRCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot9KIRC (9)view →
GO function (Protein (mass-spec))Box plot7CCRCC (11)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRC, KICH and HNSC and lower tumor activity in UCEC, THCA and BRCA. In the KIRC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.036, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV+0.036<.0019view →
UCECAllAll−0.066<.0016view →
THCAFemaleAll−0.028<.0016view →
BRCAAllAll−0.021<.0016view →
KICHAllAll+0.020<.0014view →
HNSCFemaleAll+0.025.0013view →
Pink = higher activity in tumor. all 9 lineages →

Regulation of potassium ion transmembrane transport-KIRC

Tumor-vs-normal pathway-activity box plot for Regulation of potassium ion transmembrane transport in KIRC.

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Cross-omics associations

This table shows molecular features associated with Regulation of potassium ion transmembrane transport pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,950STAD (15555)view →
Protein (mass-spec)14,760LSCC (3873)view →
Protein (mass-spec)
Protein (mass-spec)12,239LSCC (3272)view →
RNA3,435BRCA (1301)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
shRNA834BLOOD_Lymphoma (220)view →
CRISPR778LARGE_INTESTINE (156)view →
RNA
RNA10,421BONE (2590)view →
CRISPR2,541SKIN (279)view →
Protein (mass-spec)
RNA3,132LIVER (791)view →
CRISPR1,733SOFT_TISSUE (208)view →
shRNA
shRNA1,920LUNG_NSCLC_LUAD (247)view →
RNA1,884CNS (322)view →