Regulation of bone mineralization involved in bone maturation

pathway activity — cross-omics
GO:1900157Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of bone mineralization involved in bone maturation pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ILK_S186, SYNC, and SF3B1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAILK_S186 →+0.476+0.068.001<.00137
OVSYNC →+0.523+0.120.001.00137
OVSF3B1 →-0.216-0.089<.001.00137
OVSRRT →-0.246-0.099.003.00237
GBMWBP11 →-0.240-0.095<.001.00637
LUADZFP36_S60 →+0.790+0.120.001.00637
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration