Regulation of bone mineralization involved in bone maturation

pathway activity — tumor vs normal
GO:1900157Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Regulation of bone mineralization involved in bone maturation pathway differs between tumor and matched normal tissue in 12 of the 18 cancer types tested.

The strongest signal is observed in thyroid carcinoma (THCA), where pathway activity is lower in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as THCA and KIRP, show the opposite pattern, with lower activity in tumor tissue.

THCA, KIRP, and KICH show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
THCAMaleAll−0.175<.0019view →
KIRPMaleAll−0.080<.0016view →
KICHAllII,III,IV−0.066.0016view →
BRCAAllII,III,IV−0.052<.0016view →
COADAllII,III,IV−0.037.0115view →
PAADFemaleAll+0.169.0134view →
LUSCMaleAll−0.086<.0014view →
UCECAllIV−0.125.0202view →
LUADAllIII,IV−0.077.0411view →
BLCAFemaleIV+0.066.0351view →
STADAllAll+0.063.0241view →
HNSCFemaleIII,IV+0.063.0411view →
Pink = more active in tumor, green = less active in tumor. Showing the 12 strongest of 12 lineages.

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