Bundle of His cell to Purkinje myocyte signaling

pathway activity — cross-omics
GO:0086028Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Bundle of His cell to Purkinje myocyte signaling pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MACIR, H2BU1, and RNF223, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Bundle of His cell to Purkinje myocyte signaling activity versus MACIR in BRCA (Pearson r = 0.20).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMACIR →+0.452+0.360.009.00833
COADH2BU1 →+0.333+0.635.003.00332
COADRNF223 →+0.469+0.716<.001<.00132
OVGRHL2 →+0.522+0.230.006.00832
CCRCCGCDH →-0.219-0.491.002.00832
BRCATCERG1 →+0.308+0.478.008.00632
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0086028 vs MACIR — BRCA

Per-sample scatter of Bundle of His cell to Purkinje myocyte signaling activity vs MACIR in BRCA.

Explore this scatter interactively →

Exploration