Regulation of fertilization

pathway activity — cross-omics
GO:0080154Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of fertilization pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PLAT, ACTN1, and CALD1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of fertilization activity versus PLAT in LSCC (Pearson r = 0.70).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPLAT →+0.810+0.168<.001<.00137
UCECACTN1 →+0.383+0.077.005.00737
UCECCALD1 →+0.591+0.063.001.00636
GBMMYH9 →+0.398+0.065<.001.00236
GBMPPFIBP1 →+0.391+0.085<.001.00136
LSCCSRSF3 →-0.159-0.120<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0080154 vs PLAT — LSCC

Per-sample scatter of Regulation of fertilization activity vs PLAT in LSCC.

Explore this scatter interactively →

Exploration