Oxygen metabolic process

pathway activity — cross-omics
GO:0072592Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Oxygen metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are MISP3_S91, EPB41L2, and RELL1_S244, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMISP3_S91 →+0.680+0.105<.001<.00136
PDACEPB41L2 →+0.302+0.070<.001<.00136
LUADRELL1_S244 →+0.479+0.093<.001<.00136
COADUPP1 →-0.446-0.075<.001<.00135
LUADSMC4 →-0.398-0.083<.001<.00135
BRCASPARCL1_S198 →+0.854+0.052.003<.00126
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration