Cellular response to carbohydrate stimulus

associated omics data
GO:0071322Ontology (GO BP)GO biological process · ~150 member genes

Q-omics provides the Cellular response to carbohydrate stimulus (GO:0071322) pathway profile, scoring each patient from the combined activity of its roughly 150 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 7, with the highest sampling consensus in KIRP. Additionally, pathway RNA activity shows 36,820 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight HNSC, KIRP, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Cellular response to carbohydrate stimulus survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20HNSC (99)view →
GO function (Protein (mass-spec))Kaplan–Meier2PDAC (12)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Cellular response to carbohydrate stimulus activity shows favorable associations in HNSC, SKCM, BLCA and ESCA, but unfavorable associations in THCA and MESO. In the HNSC Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). HNSC ranks highest by sampling consensus for Cellular response to carbohydrate stimulus.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianIV0.3940.274<.00199view →
SKCMOSMedianIII,IV0.5620.267<.00152view →
BLCAOSQuartileAll0.8850.679.00241view →
THCAOSMedianAll0.9750.996.01029view →
ESCAOSQuartileIII,IV0.7230.238.00126view →
MESOOSMedianIII,IV0.3070.708.01424view →
Pink = unfavorable, green = favorable. all 20 lineages →

Cellular response to carbohydrate stimulus-HNSC (DFS)

Kaplan–Meier survival curve for Cellular response to carbohydrate stimulus pathway activity in HNSC: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Cellular response to carbohydrate stimulus tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 7 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in KIRP for RNA and PDAC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot7KIRP (11)view →
GO function (Protein (mass-spec))Box plot5PDAC (6)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across HNSC and lower tumor activity in KIRP, LUAD, KICH, LUSC and BRCA. In the KIRP box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.036, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRPFemaleII,III,IV−0.036<.00111view →
HNSCAllIII,IV+0.018.0029view →
LUADFemaleAll−0.022<.0017view →
KICHAllAll−0.017.0017view →
LUSCFemaleII,III,IV−0.040<.0016view →
BRCAAllIII,IV−0.027<.0016view →
Pink = higher activity in tumor. all 7 lineages →

Cellular response to carbohydrate stimulus-KIRP

Tumor-vs-normal pathway-activity box plot for Cellular response to carbohydrate stimulus in KIRP.

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Cross-omics associations

This table shows molecular features associated with Cellular response to carbohydrate stimulus pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in SOFT_TISSUE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,820STAD (23190)view →
Protein (mass-spec)10,352GBM (3810)view →
Protein (mass-spec)
Protein (mass-spec)6,958CCRCC (1855)view →
RNA1,605CCRCC (549)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,329SOFT_TISSUE (172)view →
RNA1,683BONE (265)view →
RNA
RNA6,075BONE (1960)view →
CRISPR1,956SOFT_TISSUE (226)view →
Protein (mass-spec)
RNA1,698OESOPHAGUS (257)view →
CRISPR1,697SOFT_TISSUE (164)view →
shRNA
CRISPR1,335BLOOD_Lymphoma (152)view →
shRNA1,327OESOPHAGUS (183)view →