Regulation of neutrophil mediated cytotoxicity

pathway activity — cross-omics
GO:0070948Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of neutrophil mediated cytotoxicity pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are F2RL1_S373, THUMPD1, and CAST_S297, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADF2RL1_S373 →+1.186+0.223.003<.00125
CCRCCTHUMPD1 →-0.199-0.645<.001<.00133
CCRCCCAST_S297 →+0.801+0.765<.001<.00133
CCRCCSRP19 →-0.302-0.793<.001<.00133
CCRCCHIC1_S237 →-0.642-0.666<.001<.00132
HNSCMLLT6_S258 →-0.478-0.653<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration