Cardiac muscle cell differentiation

associated omics data
GO:0055007Ontology (GO BP)GO biological process · ~127 member genes

Q-omics provides the Cardiac muscle cell differentiation (GO:0055007) pathway profile, scoring each patient from the combined activity of its roughly 127 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in COAD. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 16, with the highest sampling consensus in BLCA. Additionally, pathway RNA activity shows 36,470 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight COAD, BLCA, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Cardiac muscle cell differentiation survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20COAD (64)view →
GO function (Protein (mass-spec))Kaplan–Meier1CCRCC (6)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Cardiac muscle cell differentiation activity shows favorable associations in UCS and UVM, but unfavorable associations in COAD, THCA, CESC and LIHC. In the COAD Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). COAD ranks highest by sampling consensus for Cardiac muscle cell differentiation.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADOSQuartileIII,IV0.4480.773<.00164view →
UCSDFSQuartileIII,IV0.5680.147.00636view →
THCAOSMedianAll0.9491.000<.00129view →
UVMOSTertileII,III,IV0.8140.408.00428view →
CESCOSTertileIII,IV0.1680.676.00422view →
LIHCDFSTertileAll0.3600.513.00221view →
Pink = unfavorable, green = favorable. all 20 lineages →

Cardiac muscle cell differentiation-COAD (OS)

Kaplan–Meier survival curve for Cardiac muscle cell differentiation pathway activity in COAD: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Cardiac muscle cell differentiation tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 16 cancer types, while mass-spec protein activity shows differences in 3. The strongest signals are in BLCA for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot16BLCA (10)view →
GO function (Protein (mass-spec))Box plot3COAD (10)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows consistently lower tumor activity across BLCA, KIRC, THCA, KIRP, UCEC and BRCA. In the BLCA box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.089, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAMaleIII,IV−0.089<.00110view →
KIRCMaleIII,IV−0.028<.0018view →
THCAAllII,III,IV−0.023<.0018view →
KIRPMaleAll−0.030<.0017view →
UCECAllAll−0.065<.0016view →
BRCAAllIII,IV−0.050<.0016view →
Pink = higher activity in tumor. all 16 lineages →

Cardiac muscle cell differentiation-BLCA

Tumor-vs-normal pathway-activity box plot for Cardiac muscle cell differentiation in BLCA.

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Cross-omics associations

This table shows molecular features associated with Cardiac muscle cell differentiation pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LUNG_SCLC.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,470STAD (22286)view →
Protein (mass-spec)18,784LSCC (6745)view →
Protein (mass-spec)
Protein (mass-spec)6,249BRCA (2290)view →
RNA2,200BRCA (977)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR976LUNG_SCLC (218)view →
shRNA859BONE (175)view →
RNA
RNA6,733BLOOD_Leukemia (2641)view →
CRISPR1,919SKIN (143)view →
Protein (mass-spec)
RNA2,672BREAST (673)view →
Protein (mass-spec)1,767CNS (473)view →
shRNA
shRNA1,608OVARY (136)view →
CRISPR1,577SOFT_TISSUE (151)view →