Membrane raft localization

pathway activity — cross-omics
GO:0051665Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Membrane raft localization pathway is significantly associated with the protein abundance of multiple proteins, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SASH3, SEPTIN1, and SEPTIN6, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Membrane raft localization activity versus SASH3 in UCEC (Pearson r = 0.70).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSASH3 →+0.571+0.132<.001<.001310
LSCCSEPTIN1 →+0.936+0.198<.001<.001310
LSCCSEPTIN6 →+0.592+0.209<.001<.001310
HNSCSTAT5A →+0.495+0.191<.001<.001310
GBMWAS →+0.640+0.165<.001<.001310
LSCCWDFY4 →+0.649+0.210<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0051665 vs SASH3 — UCEC

Per-sample scatter of Membrane raft localization activity vs SASH3 in UCEC.

Explore this scatter interactively →

Exploration