Axial mesoderm development

pathway activity — cross-omics
GO:0048318Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Axial mesoderm development pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ALDH1A1_S413, ANK2_S3765, and STK4, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAALDH1A1_S413 →+0.932+0.055.004.00835
BRCAANK2_S3765 →+0.892+0.051.001.00134
GBMSTK4 →+0.179+0.067.004.00234
HNSCTPRN_S241 →+0.400+0.082<.001.00133
HNSCCEP170_S1165 →-0.240-0.062.005.00133
HNSCDENND5A_T833 →-0.566-0.164.005.00833
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration