Membrane lipid biosynthetic process

pathway activity — cross-omics
GO:0046467Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Membrane lipid biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RBISP2, LINC00111, and RASIP1, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRBISP2 →+0.244+0.146.001.00133
OVLINC00111 →+0.439+0.241.005.00433
HNSCRASIP1 →-0.599-0.105.005.00333
HNSCRIMS3 →-0.785-0.138.002.00133
COADSCGB1A1 →+0.106+0.135.004.00332
COADFAM126B →+0.239+0.107.005.00232
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration